YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77544857, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKDLQQDG SAKKGNKNLI IIGILGVLLL GAIGVAAYMM GKANAPAAEQ EEQTAGDTAP  60
   61 ANGTKVLSGL MVEVEPFIVN ILDVQGTRYL KASITLEVDS ELAIQEATER MPQIRDAVLL 120
  121 LISNKTFSEM SDLQGKLQLR AELMAKINSF FRRGKVQKIY FTEFVVQ

Type	Start	End	Confidence
Cytoplasmic	1	18	0.84
Transmembrane Helix	19	41	0.92
Non-Cytoplasmic	42	167	0.83