YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77918661, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPIPFHKSL TLKLLLAILP MPILITLIGF FAYGKLVQHH IVENVHTKLE QLERINRGLL  60
   61 ITQLEGFREQ TLRIASDEQL IVPLKLNVSF QLKAYLDLLR EQNDLASLAI YTPEGSPVAE 120
  121 LGAAPHQSPS ALSDHLNRAM TREPLAFFGP LVAADNGSEL ALMSYAPILS GNKVIGILFT 180
  181 GKAMQLGPAF SNSLLISFGK VQCQSSGADF LLPLAKTVDS DTSEGILTLG SPEICASKML 240
  241 LPFHNQTGCF LLSGFDQRQA LASSKRVLYL GIGVCAMVLL LIVPYAIILS HRLTHPLMKI 300
  301 VDIARRVPTA PDTIEWLPDS DNEIGILNRS LQAMTEQLQS SIQELQQARQ HAEEASRAKS 360
  361 QFLVNMSHEI RTPMNGVIGM TELLLDSPLA EEQRQIADTV AESGRALLQI INDILDFSKL 420
  421 EAGKLQLENI PFDICGIVEE AAGLFAAKAQ TKGLELVVDM ADDVPPLLLG DPGRLRQVLV 480
  481 NLLSNALKFT KQGYVLVTLR AHHITEQSAT IVVSIRDSGI GIEPQHIPQL FRPFSQADGS 540
  541 TTRKYGGTGL GLSICQDLIG HMGGQIHVFS QPGQGSNFWF EMTMTKDPAC GMHHVACIPE 600
  601 LKNMQALIVD PHPLTRRSVQ QQLREWGIKA KTADHGKKAL AMLQAQNFQI ILVALTLPDM 660
  661 PGRELIQHCC DVAQTVPKHI ITLGLTGQKL PPCRISDATT VSYLTKPIRP SKLLLHLTNA 720
  721 PPLEDNVQSQ TPCPNPASET STPTKARVLL VEDNPVNQQV AKGMLEKLGC NVTLAADGQE 780
  781 ALTAYSHSPF DLLFMDCQMP NMDGYEATRA IRADEKQHHK TTCPIIAMTA HTLPGDRERC 840
  841 LKAGMDDYLG KPFTMRQVRT LLNRWLSARN HDEPSAGNED HTPAGTAVSS GPSRDSAEAP 900
  901 LNRDALATIR SMDGPEHQSG LLNKVIDIYL KEAPNMIGRM EQALRQDHLS VVYRLAHSLK 960
  961 SSSANLGAGP LSNLCRKMEG AKTLSPEQRE LLMASIQNEY NRVQFALIQE GGPG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle