YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77544341, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTLFYAVT FVPWTLLVIL TGLPFSYVHK NFLHSYATFW AKVSLRLAGV RLVVEGRENL  60
   61 PAEGAVVFMP NHQSNFDILA LFAALSRQFR WLAKEELFHI PLFGLTMRRA GYIPVDRSNR 120
  121 KKSVESMRHA IERISDGTSV VIFPEGTRSP DGHLKEFKAG SFTLAIQAQV PIVPIAITGS 180
  181 RDVMPKHSRW IRGGRVTVTI MPPVSTADRA VKERNELMQE VRGPIEALVE KALQS

Type	Start	End	Confidence
Cytoplasmic	1	6	0.57
Transmembrane Helix	7	28	0.70
Non-Cytoplasmic	29	235	0.68