YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157878946, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTSALKPK DRIVASTRRS KFVLCEECHQ NVPIEEWPDH RDRLRKVSLV EEVSRFHHTL  60
   61 VRLMGEFLMW VLRSVYFREV TVVGRENIPC TGAVVFYGNH QNQFIDALMM HSHCGRPVRF 120
  121 LMAEKSFQRP VIGTLGRIFN SVPVVRPQDV PLVDGEGKLV RTEGKFIVGA GTHFSRLSKG 180
  181 DVLSWGVPGN AKCRAQVSRI TSDEEVEVTV PIPAEHEVHT PTSFKYSVRI DHSEMYAQVY 240
  241 DTLQKNHCIG IFPEGGSHDH TSLLPLKAGV ALFSLGAAER HISVKIVPVG LTYLYGHKFR 300
  301 SRAYIEFGEA FSPPDDLVKL FDTDKRKATG LFLEQLNAAL RAVTINVPDY KTLSFLHSFR 360
  361 QLYQPPNCML SGHDYLRLIR RLGNVIEEQR KSAEFAEFRE KVENYSDFCK ALMIRDSQAA 420
  421 TLKRLLNADN EALQVGLLLR RVFALYLMAV ILVPFFVVGL PIGGIIKYLA LKQTKRALSE 480
  481 SSVKIVGADV TGSFKVLFAF AVVPGVFLLV TFIVFLYSDS RTALVILFSL PMAMYVSLLI 540
  541 LQEAIMELRA ALPLLMSLVS QHMQFKKLYE RREDLARQAR LIVHKYDPQL EEEIKVHGNA 600
  601 GDSNDDLNRE PSLFSLRYNV RRRQATNS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle