YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85794840, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPELILYVAI TLSVAERLVG PGHACAEPSF RSSRCSAPLC LLCSGSSSPA TAPHPLKMFA  60
   61 CSKFVSTPSL VKSTSQLLSR PLSAVVLKRP EILTDESLSS LAVSCPLTSL VSSRSFQTSA 120
  121 ISRDIDTAAK FIGAGAATVG VAGSGAGIGT VFGSLIIGYA RNPSLKQQLF SYAILGFALS 180
  181 EAMGLFCLMV AFLILFAM

Type	Start	End	Confidence
Cytoplasmic	1	130	0.78
Transmembrane Helix	131	157	0.82
Non-Cytoplasmic	158	171	0.66
Transmembrane Helix	172	196	0.91
Cytoplasmic	197	198	0.64