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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Nrx-1-PB, FBpp03...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAPHSATYQ DNYADAAMTA RTRPSMDMDQ QRNRNQAELR LLPAQRTSTS AFESPDLRFN  60
   61 KARRRRRSEQ VPPVVVEYRR SYRVLIVSAL LVSLAASFVT LSAGFQLDGS QNSFYTFRKW 120
  121 YTGLNGTLEL EFKTEQPNGL VLYTDDGGTY DFFELKLVEG ALRLRYNLGG GAQIITVGRE 180
  181 LHDGHWHKVQ VLRNDEQTSL IVDGVSQQRS TKGKEFQFGK FASNSDVYVG GMPNWYSSKL 240
  241 ALLALPSVIF EPRFRGAIRN LVYADQPGGS TRRQEIKQQR DIKCGDVPCD HGELPARERP 300
  301 LRGVRGGNTT DACERNDPCQ HGGICISTDS GPICECRNLE YDGQYCEKEK APSEATFRGT 360
  361 QFLSYDLGQT GAEPIVSAQD AISFYFRTRQ PNGLLFYTGH GTDYLNLALR DGGVSLTMGL 420
  421 ANGKQEMHIK PSKVRFDDHQ WHKVTVHRRI QEISSITSFC RLVTVVDDVY TDHSHIAGKF 480
  481 TMLSSSRVYV GGAVNPRALL GARVHTNFVG CLRKVEFSAD TLNLNLIDLA KSGSKLIQVA 540
  541 GNLEYQCPSG DPQDPVTFTT RESHLVLPPW ETGKQSSISF KFRTKEPNGI IVLATGSKQP 600
  601 RAKNPVLIAI ELLNGHIYIH LDLGSGASKV RASRRRVDDG DWHDLILRRN GRDAKVSVDG 660
  661 VWNDFRTPGD GTILELDGHM YLGGVGPAYN SVSWPAAIWT ATLRQGFVGC LRDLVLSGKA 720
  721 IDIAAFARVQ DSASVKPSCH VQANVCNGNP CLNGGTCLEG WNRPICDCSA TLYGGPTCGR 780
  781 ELATLAFNGS QHMTIWLGNG QGTKTQTEEL VIRFKTSRPA GLLLLTSAES NSPDRLEIAL 840
  841 VAGRVRASVR LSDREKNLLA GQSVLNDNNW HTIRFSRRAS NLRLQVDGAP PVRGMLSETI 900
  901 LGRHSTMEIR SVHLGGLFHA EEEIQMTSTM PNFVGQMQGL VFNGQRYLDI VKSLGPELSA 960
  961 LPSATFKLTA RFVNSPAGQP YHAATFRSKH SYVGLAMLKA YNSISIDFRF KTVEPNGLLV1020
 1021 FNGGRRNDFV AVELVNGHIH YTFDLGDGPV TMRDKSRIHM NDNRWHQVSI RRPGPKTHTL1080
 1081 TVDDSFEIIS LTGNNMHLEL AGILYIGGVF KDMYSKLPAS ISSRSGFEGC LASLDLGDAS1140
 1141 PSLTSDAVVP SSLVVSGCEG PTKCSQNACA NRGNCVQQWN AYACECDMTS YTGPTCYDES1200
 1201 IAYEFGNNKG MVQYTFPENA QADTEEDNIA LGFITTRPDA VLLRVESATT QDYMELEIVE1260
 1261 GNIFMVYNIG SVDLPLGEIG TKVNDNAYHV VRFQRKGGNA TLQLDDYNVQ ALTPQSHHST1320
 1321 VFNTMSNVQV GGKFSRNGRN RIERPFAGVI AGLSVNKLRI LDLAVERDPH ITIRGDVQLV1380
 1381 TGVLDRNDLQ RMQQTPASGY PGALDDLIFS GAGSGCRGDD EDECTPPFES GSGDDLITPV1440
 1441 YVPPTKQTTT SQQGNSLSTG GSSSGGVITN GTERACDDED CVHGSGDYGE TTEQFTSTST1500
 1501 ARGSESNNEM VTITTTGRSD VTTEQHQGSS SSSSSGSTPS YATTQSSSSS SSGGSAASTP1560
 1561 GQVSTTSSVA TSSTQRATSS STSTSSSTTS TTTTTTTTQA TPPPEIRSTV TERETTPYDI1620
 1621 YIAGGGMGGS GRNDHDRMQL PDEHHPLPPL PPPIPPQDPP PYGPYGGNTY NTNMNNYRPK1680
 1681 GKGGRINSIE EERTAMIIGI VAGILIAVVL VILLVLWLKS NGDRGYKTES EKAAAYGSHN1740
 1741 PNAALLGNTS TNGSYHQQRQ HHMHGGGGGG GAGQQQHHAQ QQMHNGHNGN GNGGGGGGGG1800
 1801 MMSSGSGSLG YGSDGRPQMA GLVQPKAKKR DSKDVKEWYV 

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