YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77458220, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIIALGLM LAALQGCSLR EPMPAEQDTD TPTLTPRAST YYDLLKMPRP KGRLMAVVYG  60
   61 FRDQTGQYKP TPASSFSTSV TQGAASMLMD AMQASGWFVV LEREGLQNLL TERKIIRASQ 120
  121 KKPNTPVNIQ GELPPLQAAN MMLEGGIIAY DTNVRSGGEG ARYLGIDLSR EYRVDQVTVN 180
  181 LRAVDVRSGQ VLANVMTSKT IYSVARSAGI FKFIEFKKLL EAEVGYTTNE PAQLCVLSAI 240
  241 EAAVGHMVAQ GIERRLWQVA GDASTPSQDD VLNRYLTQNK VDPDAE

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	286	0.99