YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71911221, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYLGHSFQS RHGILRFPLI VVIKTGSNVI SWAFSLAFVL KCGKEMAMAN HRIDRVGMEI  60
   61 KREVNDILQK KVRDPRVQGV TITEVQMQGD LSLAKVYYTI MSDLASDNQK AQTGLEKATG 120
  121 TIKRELGKQL TMYKIPDLVF EKDNSIAYGN KIDQLLRDLD NKS

Type	Start	End	Confidence
Non-Cytoplasmic	1	19	0.71
Transmembrane Helix	20	40	0.70
Cytoplasmic	41	163	0.55