YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	AMTN_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVVLLLCL LGSAQSLPRQ LSPALGAPAT KPTPGQVTPL TQQQPNQVFP SISLIPLTQL  60
   61 LTLGSDLPLF NPATMPHGTQ TLPFTLGPLN GQQQLQPQML PIIVAQLGAQ GALLSSEELP 120
  121 LASQIFTGLL IHPLFPGAIQ PSGQTGAKPD VQNGALPTRQ AGASPANQAT TPGHTTPAVT 180
  181 DDDDYEMSTP AGLQRATHTT EGTTMDPPNR TK

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	212	0.98