YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ODAM_RAT
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIILLGLI GATSSAPLIT QRLLSASNSH ELLLNLNNGQ LLPLQFQSAF NSWIPPFPGL  60
   61 LQQQQQQAQV SGHPQFPLST LESFAGLFPN QIPFSRQVGF AQGGQAGQPD FSQQQTPSQT 120
  121 QQASPMSYVV PVKVPQDQTQ MFQYYPVYML LPWEQPQQTV TSSPQQTGQQ LYEEQIPFYN 180
  181 QFGFVPQQAE PGVPGGQQHL VLDSFVGTAP ETPGMPAVEG PLYPQKEPIG FKQDNVGVST 240
  241 PSTSPKPDTG NFFTSEINPT IAPLLPEQKV NADSLREP

Type	Start	End	Confidence
Signal Peptide	1	20	0.91
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	278	0.99