YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58866720
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTHKHAFV LAGTSSGCGK TTLTLGLLCA LAGRGLKVQP CKVGPDYLDT GWHQAVSGVS  60
   61 SCNLDSFMLP EPALNGLFSH HLRQADISVI EGVMGLYDGY GSDPHYCSSA ALARQLGCPV 120
  121 ILVVDGKAVS TSIAATVLGF QQFDPALNIA GVIVNRVNSD GHYQLLKHAI EHYCRVPVLG 180
  181 RVPVMDDVAL PSRHLGLVGA GEQTICLETW RKFGQLLTQT LDIDRLLALS TLDQLPPGAL 240
  241 PAFPHPQLAE GLTLALARDE AFSFYYPDCL DLLARAGVRL VPFSPLHDNQ LPACDMVWFG 300
  301 GGYPELHARA LSANQRMRQS VQAAHQRRIP IYGECGGLMY LGQQLITSEG EPFAMAGVLE 360
  361 GVSQMGARLT RFGYCEATAR HDTLLAKAGE SLRGHEFHYS DFTTPLSPQF DCLKTRDGAV 420
  421 QRRWQGGWQS GATLGSYLHL HFARRPAMLT GWLRAARSHL

Type	Start	End	Confidence
Signal Peptide	1	32	0.76
N-region	1	23
H-region	24	29
C-region	30	32
Cleavage Site	32	33
Non-Cytoplasmic	33	460	0.98