YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207088083
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSFPPYDV LIVGAGLIGS CLALALGQSP KLRIALVESN PPDLGDVLQG TYDLRVRAIS  60
   61 RASENIFKNL DAWQGMAAQR ISPFREMHVW DGTGSGEIHF DSAEIGEPHL GHIIENQVIQ 120
  121 NALLKQCQNL NNIDLYTPVQ ACGIIQHEQK IYLQLAEGQR LGARVLIGAD GTNSRVRQWA 180
  181 GISNRGWDYQ QKGLVATVQT EKPHQETAWQ CFLPHGPLAF LPLDNPYYCS IVWSTTPEEA 240
  241 TRLLALEDQE FTTALAAAFE YRLGAIEALG PRAAFPLRLR HAETYIQPRL ALVGDAAHTI 300
  301 HPLAGQGANL GLLDAATLAE VLIAAQRRKK DLGSLAVLRR FERWRKGDNL ATQLVMDGFK 360
  361 RLFGDTQFPT RLIRNFGLIT TNAATPIKCL IMRRASGLTG DFPLLAKPGV IKSWGMDTSN 420
  421 YV

Type	Start	End	Confidence
Signal Peptide	1	27	0.82
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	422	0.97