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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76884341, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.12
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDMAKNIIL WVVIALVLMS VFNSFDTRQV SGHHIDYSRF IADVKSGQVN KVVIDGRHIS  60
   61 GETSEGKHFT TYSPGNDPGL IGDLLGNGVV IEAKPEEGTG LLMQVFISWF PMLLLIAVWI 120
  121 FFMRQMQGGA GGRGAMSFGK SRARMLSEEQ VKVTFSDVAG CDEAKEEVQE LVEFLREPGR 180
  181 FQKLGGKIPR GVLMVGPPGT GKTLLARAIA GEAKVPFFTI SGSDFVEMFV GVGASRVRDM 240
  241 FENAKKHAPC IIFIDEIDAV GRQRGAGLGG GHDEREQTLN QMLVEMDGFE GNEGVIVIAA 300
  301 TNRPDVLDPA LLRPGRFDRQ VVVSLPDIRG RAQILKVHLR KVPVAEDVEP ALIARGTPGF 360
  361 SGADLANLVN EAALFAARGS KRLVDMQDLE QAKDKILMGV ERRSAVMSED DKRLTAYHEA 420
  421 GHAIIGRLVP SHDPVYKVSI IPRGRALGVT MFLPEEDRYS LSKLQIESQI SSLFGGRLAE 480
  481 ELIFGVEYVT TGASNDIQRA TELARNMVTK WGLSEKLGPL AYGEEEGEVF LGHSVTQHKG 540
  541 IADTTASEID TEIRAIIDRN YLRAKQLLEE NMDKLHVMSD ALMKYETIDK EQIDDIMAGK 600
  601 EPRPPKVSGS DVEPPSGSDA VPPKGKEEQP VGGGSIPASQ H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle