YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|207091045
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVDFPTIML AAAVITGTIW GLDAWLWAPA RREAAARKGG AGQVDLKEAS KEPVLVEYAR  60
   61 SFFPIIVIVL VLRSFLVEPF RIPSGSMIPT LRVGDFILVN KFIYGIRLPV INKKIIDMGE 120
  121 PQRGDVVVFR YPKDPSVDYI KRVVGLPGDR IGYFNKTVYI NGELMPQESV GPYYQEDSSY 180
  181 NHSAVLRVEH LGNREHQIVV EPGTSLVEGE YIIPEGHYFM MGDNRDRSND SRFWGVVPEE 240
  241 NLVGKAFMVW MSWQWDQGGV VWNRIGEPIQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.82
Transmembrane Helix	8	28	0.93
Cytoplasmic	29	57	0.89
Transmembrane Helix	58	77	0.77
Non-Cytoplasmic	78	270	0.72