YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76684016
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGARSRLR GMRRGAESRS FSAWSLACAG DPRRRGGGDM EVKDANAVLL SNYEVFQLLT  60
   61 DLKEQRKESG KNKHSSGQQN LNTIIYETLK YVSKTPCKHQ SPEIVREFLT AVKSHKLTKA 120
  121 EKLQLLNHRP VTAVEIQLMV EESEEWLTEE QIEALLHTVT SILPAGPEAE QQQNASDDVA 180
  181 MDEEDPA

Type	Start	End	Confidence
Signal Peptide	1	30	0.62
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	187	0.99