YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76682481
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAALKPCRVL LSEICNKTHS CHKSSCYNLA KNFTFLEEYY IHFGFVQRQS KLLASSSPPL  60
   61 KMIAISAVNS ALLFSLLCEA SAVVLLNSTD SSPPTNNFTD IEAALEAQLD SADIPKTRRK 120
  121 RYISQNDMIA ILDYHNQVRG KVFPPAANME YMVWDENLAK SAEAWAATCI WDHGPSYLLR 180
  181 FLGQNLSVRT GRYRSILQLV KPWYDEVKDY AFPYPQDCNP RCPMRCFGPM CTHYTQMVWA 240
  241 TSNRIGCAIH TCQNMNVWGA VWRRAVYLVC NYAPKGNWIG EAPYKVGVPC SACPPSYGGS 300
  301 CTDNLCFPGV TSNYLYWFK

Type	Start	End	Confidence
Cytoplasmic	1	62	0.59
Transmembrane Helix	63	83	0.55
Non-Cytoplasmic	84	319	0.98