YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76675933
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGWQSYVDN LMCDGCCQEA AIVGYCDAKY VWAATAGGVF QSITPVEIDM IVGKDREGFF  60
   61 TNGLTLGAKK CSVIRDSLYV DGDCTMDIRT KSQGGEPTYN VAVGRAGRAL VIVMGKEGVH 120
  121 GGTLNKKAYE LALYLRRYPN ITIWSVSSLF FIGPTFICSL SFYMKLHYCG LGCLVMNFSH 180
  181 MYSVPYYC

Type	Start	End	Confidence
Cytoplasmic	1	140	0.82
Transmembrane Helix	141	163	0.79
Non-Cytoplasmic	164	188	0.52