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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76674964
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVEGGLSTN MEAMHLDKKI WGRGMEREAS EAILSSTSSP LRGVGVCSGT APPLALPDWL  60
   61 RVQRTESRGR NPRSPGGERT PGGPADPRGA REGALAQPPT RLQRCRRTVP EAPPPRAVMW 120
  121 NPLHETDSAS VAWRRPRRLC AGAVVLGAGL FVLGFLFGWF IKSSSEATNI PQHNVKKAFL 180
  181 DELKAENIKT FLYNFTRIPH LAGTEQNFQL AKEIQAQWKE FGLDSVELAH YDVLLSYPNE 240
  241 TVPNYISIID EDGNEIFNTS LFEPPPPGYE NVSDVVPPFS AFSPQGMPEG DLVYVNYART 300
  301 EDFFKLERDM KINCSGKILI ARYGKIFRGN KVKNAQLAGA RGIILYSDPA DYFAPGVEAY 360
  361 PDGWNLPGGG VQRGNILNLN GAGDPLTPGY PANEYAYRRE IAEAVGLPNI PVHPIGYYDA 420
  421 QKLLERMGGL APPDDSWKGG LQVPYNVGPG FLGNFSAQKV KMHIHSNNKV ERIYNVIGTL 480
  481 RGAVEPDRYV ILGGHRDSWV FGGIDPQSGA AVVHEIVRSF GKLKKEGWRP RRTILFASWD 540
  541 AEEFGLFGST EWAEENSRLL QERGVAYINA DSSIEGNYTL RVDCTPLMYS LVYNLTKELR 600
  601 SPDEGFEGKS LFESWNEKSP SPEFSDLPRI SKLGSGNDFE VFFQRLGIAS GRARYTKDWE 660
  661 TSTFSSYPLY HSIYETYELV EKFYDPAFKY HLTVAQVRGG IIFEIANSIV LPFDCRDYAV 720
  721 VLRKYADNIY NISMKHPQEM KTYSVSFDSL FSAVKNFTEI ASNFSERLQD LDKNNPILLR 780
  781 IMNDQLMFLE RAFTDPLGLP DRPFYRHIIY APSSHNKYMG ESFPGIYDAL FDIENRVDPS 840
  841 KAWEEVKRQI SIAAFTVQAA AGTLREVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle