YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76673500
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRGVQSVR AAVGSLCAIL APSVPCSPRP WGPRAGAVQA LSTGPAVLSV RKFTGKHEWV  60
   61 TTEDGIERVG ISNFAQKALG DVYCSLPEVE TKLNKQEEFG ALKILLHAFP QAPPSFSTRL 120
  121 QIWRENQRQE DVVKSPLKEK DNSDSPMAMA VEFKTYVDQA CRAAEEFVNI YYETMDKRRR 180
  181 ALTRLYLDKA TLIWNGNVVT GLEALANFFD MLPSSEFQVN MLDCQPVHEQ ATQSQTTVLV 240
  241 VTSGTVKFDG NKQHYFNQNF LLTAQTTANN TVWKIASDCF RFQDWATI

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	288	0.99