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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149042868, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPGLPLWL LSTALFSLLA GSSAFLSYPR LKGRFQRDRR NIRPNIILVL TDDQDVELGS  60
   61 MQVMNKTRRI MEQGGAHFIN AFVTTPMCCP SRSSILTGKY VHNHNTYTNN ENCSSPSWQA 120
  121 QHESRTFAVY LNSTGYRTAF FGKYLNEYNG SYVPPGWKEW VGLLKNSRFY NYTLCRNGMK 180
  181 EKHGSDYSTD YLTDLITNDS VSFFRTSKKM YPHRPVLMVI SHAAPHGPED SAPQYSRLFP 240
  241 NASQHITPSY NYAPNPDKHW IMRYTGPMKP IHMEFTNMLQ RKRLQTLMSV DDSMETIYDM 300
  301 LVETGELDNT YIVYTADHGY HIGQFGLVKG KSMPYEFDIR VPFYVRGPSV EAGSLNPHIV 360
  361 LNIDLAPTIL DIAGLDIPAD MDGKSILKLL DSERPVNRFH LKKKLRVWRD SFLVERGKLL 420
  421 HKREGDKVNA QEENFLPKYQ RVKDLCQRAE YQTACEQLGQ KWQCVEDASG ALKLHKCKGP 480
  481 VRFGGGGDRA LSNLVPKYDG QSSEACSCDG GGGGGDYKLG LAGRRKLFKK KYKTSYARNR 540
  541 SIRSVAIEVD GEVYHVGLDN MPLPRNLTKR HWPGAPEDQD DKDGGSFSGT GGLPDYSAPN 600
  601 PIKVTHRCYI LENDTVQCDL DLYKSLQAWK DHKLHIDHEI ETLQNKIKNL REVRGHLKKK 660
  661 RPEECDCHKV SYHSQHKGRL KHKGSSLHPF RKGLQEKDKV WLLREQKRKK KLRKLLKRLQ 720
  721 NNDTCSMPGL TCFTHDNHHW QTAPLWTLGP FCACTSANNN TYWCLRTINE THNFLFCEFA 780
  781 TGFIEYFDLS TDPYQLMNAV NTLDRDVLNQ LHVQLMELRS CKGYKQCNPR TRNMDLGLRD 840
  841 GGSYEQYRQF QRRKWPEMKR PSSKSLGQLW EGWEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle