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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76672739
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVVLAGMKT TIWIQSGNLS EVSTPVLWKS ASLHSIPFSL SLLQLAALLL HFGVWKPAKL  60
   61 TFPPRLSRSP REDALCLRER YKSWVRLKLP IEASACLSIM GSGQSVPKDS SLACVLKTLK 120
  121 PLLLTELKAN RLKQLYTDHW PEFGTFDFNI LSDLRNFLKQ NGKRPYNSKV LTASTSPNWQ 180
  181 QMSLSVSWLQ LFLEQLLADI WVSSPQGSTL KHIDDYISIL WLQKTFYNFY SFSDHSFLSS 240
  241 SYSPLGLCFP KDTPEHALCC SKLKAERYWE RSLAFSTHPS LTAFTLCTVS QWLLALGSPS 300
  301 EGLDSLGTRR GGKVLFWGKD KVSRLQPLAQ PCVPTGLIQV PLVPQSSRTV TAVPVRGSLP 360
  361 SLPDASRADA RSPVGRRKTS PQRPRGRGRR ERSWGCGGAG DLGEEGAGKP PCGSPRTRRP 420
  421 EQGSGAPPGS VLNAVSTALN DTVEFYRWTL SITDKRVENW PLMQSPLPTL CISTLYLLFV 480
  481 WLGPKWMKDR EPFQMRLVLI LYNFGMVLLN LFIFRELLMG SYNAGYSYIC QTVDYSDNVH 540
  541 EVRIAAALWW YFISKGIEYL DTVFFILRKK NNQVSFLHVY HHCTMFTLWW IGIKWVAGGQ 600
  601 AFFGAQINSF IHVIMYSYYG LAAFGPWIQK YLWWKRYLTM LQLVQFHVTI GHTALSLYTD 660
  661 CPFPKWMHWA LIVYAVSFIF LFLNFYVRTY KEPKKAKPGK TATNGISANG VNKSENHLVV 720
  721 ENGKKQKNGK AKGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle