YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPX8_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLTAYPLR CSGPKAKAFA VLLSMVLCTV MLFLLQLKFL KPKINSFYTF EVKDANGRVV  60
   61 SLEKFKGKVA LVVNVASDCQ LTDRNYLALQ ELHKEFGPFH FSVLAFPCNQ FGESEPRPSK 120
  121 EVVSFARNNF GVTFPIFHKI KILGSEAEPA FRFLVDSSKK EPRWNFWKYL VNPEGQVVKT 180
  181 WRPEEPIEVI RPEIAALIRQ MIIKKKEDL

Type	Start	End	Confidence
Cytoplasmic	1	17	0.69
Transmembrane Helix	18	37	0.85
Non-Cytoplasmic	38	209	0.82