YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76671099
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQSIVDSFP KLLHAVAASA SVWEQAACSS LSSDQQSYEH LHEMTTLLET SSLAEPQGLF  60
   61 TDPLQSHRES ISRCLLMSPN QWMGICTLAF LTPQMNIGRN NQTLTVPLTA HVWSKRPIQF 120
  121 IHYFGSEILA GIMICSMLTF EIFFGLLPRC SRESNMGHQQ LYWSHPRKFR QGSRSSRVCS 180
  181 NRHGLIRKCG LNMCRQCFRQ YTKDIGFIKL D

Type	Start	End	Confidence
Cytoplasmic	1	77	0.67
Transmembrane Helix	78	92	0.51
Non-Cytoplasmic	93	122	0.75
Transmembrane Helix	123	147	0.78
Cytoplasmic	148	211	0.74