YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76670627
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAASLVSVL LVAAERHRWQ RVPRLLLPPR GWAWKQRTRK YATTTGQNIS KVLIANRGEI  60
   61 ACRVIRTAKK MGVQSVAVYS EADRNSMHVD MADEAYLIGP APSQQSYLSM EKIIQVAKIS 120
  121 AAQAIHPGYG FLSENMEFAE LCKQEGIIFV GPPSSAIRDM GIKSTSKSIM AAAGVPVVEG 180
  181 YHGEDQSDQC LKEHARTIGY PVMIKAVRGG GGKGMRIVRS EKEFQEQLES ARREAKKSFN 240
  241 DDAMLIEKFV DTPRHVEVQV FGDHHGNAVY LFERDCSVQR RHQKIIEEAP GPGIKPEVRK 300
  301 KLGEAAVRAA KAVNYVGAGT VEFIMDSKHN FYFMEMNTRL QVEHPVTEMI TGTDLVEWQL 360
  361 RIAAGEKIPL SQEEITLRGH AFEARIYAED PNNNFMPGAG PLVHLSTPRA DLTTRIETGV 420
  421 RQGDEVSMHY DPMIAKLVVW AADRQAALTK LKYSLRQYNY LAHKSHFSFL MFTCFPNLSQ 480
  481 LNISTPPSQH HFLHPVYHTV AATGPSCSAT LGLMFINLLL NFKFFLDQYS PFASSSGRRL 540
  541 NICYSRNMTL RDGKNNVAIA VTYNRDGSYS MQIEDKTFHV LGDLCSEGDC TYLKSSVNGV 600
  601 ASKIKLIILK NTIYLFSMDG SIQIGIPVPR YLSSASSGET QGGAVAPMTG TVEKVFVKAG 660
  661 DRVKAGDSLM VMIAMKMEHT IKAPKDGTIK KVFYKEGSQA NRHAPLVEFE EEDSDEREAD 720
  721 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle