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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76667832
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWENEDSKRH TSNSRPNISV LKNNPMCYPF LTCADIKETG TEEAPLPLPP PPPRGRRAFP  60
   61 STRAQLGPEL PPRGHGRGCC PRGLKVGAGD PALVPASNCS VSGCAGLSSR LPAPGRPGPA 120
  121 GGGERAPRGE RASAAVETEA GGRHPRARTA AGAMSSKVRK CKEQARVTFP APAAEEEDED 180
  181 EGAEPQRRRR GWRGVNGGLE PRSAPPQRGP RAYCPPPFSP GPDMSMEESP SLRRKTVMRE 240
  241 KGRRQAVRGP AFMFNDRGTS LTAEEERFLD AAEYGNIPVV RKMLEESKTL NVNCVDYMGQ 300
  301 NALQLAVGNE HLEVTELLLK KENLARIGDA LLLAISKGYV RIVEAILNHP GFAASKRLTL 360
  361 SPCEQELQDD DFYAYDEDGT RFSPDITPII LAAHCQKYEV VHMLLMKGAR IERPHDYFCK 420
  421 CGDCTEKQRH DSFSHSRSRI NAYKGLASPA YLSLSSEDPV LTALELSNEL AKLANIEKEF 480
  481 KNDYRKLSMQ CKDFVVGVLD LCRDSEEVEA ILNGDLESAD PLEMHRHKAS LSRVKLAIKY 540
  541 EVKKFVAHPN CQQQLLTIWY ENLSGLREQT VAIKCLVVLV VALGLPFLAI GYWIAPCSRL 600
  601 GKVLRSPFMK FVAHAASFII FLGLLVFNAS DRFEGITTLP NITVIDYPKQ IFRVKTTQFT 660
  661 WTEMLIMVWV LGMMWSECKE LWLEGPREYI LQLWNVLDFG MLSIFIAAFT ARFLAFLQAT 720
  721 KAQQYVDSYV QESDLSEVTL PPEIQYFTYA RDKWLPSDPQ IISEGLYAIA VVLSFSRIAY 780
  781 ILPANESFGP LQISLGRTVK DIFKFMVLFI MVFLAFMIGM FILYSYYLGA KVNAAFTTVE 840
  841 ESFKTLFWSI FGLSEVTSVV LKYDHKFIEN IGYVLYGIYN VTMVVVLLNM LIAMINSSYQ 900
  901 EIEDDSDVEW KFARSKLWLS YFDDGKTLPP PFSLVPSPKS FVYFIMRIIN FSKCRRRRLQ 960
  961 KDIEMGIGNS KSRLNLFTQS NSRVFESHSF NSILNQPTRY QQIMKRLIKR YVLKAQVDKE1020
 1021 NDEVNEGELK EIKQDISSLR YELLEDKSQA TEELAILIHK LSEKLSPSVL RCE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle