YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76667061
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLPRALLPL LLQACWASAQ DDPVASRAIA FQDCPVDLFF VLDTSESVAL RLKPYGALVD  60
   61 KVKSFTKRFI DNLNDRYYRC DRNLVWNAGA LHYSDEVEII RGLTRMPSGR DELKSSVDAV 120
  121 KYFGKGTYTD CAIKKGLEEL LVGGSHLKEN KYLVVVTDGH PLEGYKEPCG GLEDAVNEAK 180
  181 HLGIKVFSVA ITPDHLEPRL SIIATDHTYR RNFTAADWGQ SRDAEEVISQ TIDTITDMIK 240
  241 NNVEQVCCSF ECQPARGPPG PRGDPGYEGE RGKPGLPGEK GEAGDPGRPG DLGPVGYQGM 300
  301 KGEKGSRGEK GSRGPKGYKG EKGKRGMDGV DGMKGETGFP GLPGCKGSPG FDGIQGPPGP 360
  361 KGDPGAFGLK GQKGEPGADG EPGRPGSTGP PGDEGEPGEP GPPGEKGEAG DEGNAGPDGA 420
  421 PGERGGPGER GPRGTPGARG PRGDPGEAGP QGDQGREGPV GVPGDPGEAG PIGPKGYRGD 480
  481 EGPPGTEGPK GAPGPAGPPG DPGLMGERGE DGPPGNGTEG FPGFPGYPGS RGPPGINGTK 540
  541 GYPGLKGDEG EAGDPGEDNN DIAPRGAKGA KGYRGPEGPQ GPPGHVGPPG PDECEILDII 600
  601 MKMCSCCECK CGPIDILFVL DSSESIGLQN FEIAKDFIVK VIDRLSKDEL VKFEPGQSHA 660
  661 GVVQYSHNQM QEHVDLRDPN IRNAQDLKEA IKKLQWMGGG TFTGEALQYT RSRLLPPTPN 720
  721 NRIALVITDG RSDTQRDTTP LSVLCGPDIQ VVSVGIKDVF GLAAGSDQLN VISCQGLAPQ 780
  781 GRPGISLVKE NYAELLDDGF LKNITAQICI DKKCPDYSCP ITFSSPADIT ILLDGSASVG 840
  841 SHNFDITKRF AKRLAERFLT ASRTDPGQDV RVAVVQYSGT GQQRPERAAL QFLQNYTVLA 900
  901 NTVDSMDFFN DATDVMDALG YVTRFYREAS SNAAKKRLLL FSDGNSQGAT PAAIEKAVQE 960
  961 AQRAGVEIFA VVVGRQVNEP HVRVLVTGKA AEYDVVFGER HLFRVPSYQA LLRGVFYQTV1020
 1021 SRKVALD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle