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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76662247
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRKLIKLL VFELLEFTAF CVPTLVIMEQ FAVAYSTTRH PPDKTRYWLI VSCSIAYVAS  60
   61 VSLLIWVPVK VLLYKKRHLY QKIKGWRPVL MMCIVLTTLP SFSFSIAVTE VQKNINGSTD 120
  121 VLPDMLPDLP VSLVLTCLIV VDIIEKLRIY PLRGRQKSNE DRHIHTTNLQ QIRTVTCEAK 180
  181 QNEENPTRPQ PANRTHLSRP LGGATGNSSP ELEGPQDPTF EWGILRTLSQ QDVRAEIFLG 240
  241 SFPLWADTIE MVRVAGHPRV YKSGWVYVVY IFSYISLLRM IFTPRNPLLN SFAILLQDLP 300
  301 FIFVRLSLII GLGTITPKPF KSGRFLHAPF QLGSSEKGGA GRDSWGLTGL VLPALFSPSV 360
  361 EEKDKLWTMR PSPLLSLLFL LPVAVQLLDW EKSWEKLAEE GAVRPERGSW SRVGEGASEP 420
  421 CGQMSSAFLG TLGDKVEYTR PFLIYNEDHK RCVEALSPSA VQTAVCDPNN EAQKFRWVSE 480
  481 SQIMSVALKL CLGVPSKTDW VPVTLYACDS RSEFQKWECK NDTLLGIKGE DLFFNYGNRQ 540
  541 EKNIMLYKGS GLWSRWKIYG TTDDLCSRGY EAMYTLLGNA NGATCAFPFK FENKWYGECT 600
  601 KAGRSDGWLW CGTTTDYDTD RLFGYCPLKF EGSESLWTKD PLTSIYYQIN SKAALTWHQA 660
  661 RKSCQQQDAE LLSITEIHEQ TYLTGLTNSL TSGLWIGLNS LNFNSGWQWS GGSPFRYLNW 720
  721 LPGSPSAEPG KSCVSLNPGK NAKWENLQCV QKLGYICKKG NTTLNPFVIP SESDVPTNCP 780
  781 SQWWPYAGHC YKIYREEKKI QRDALRACRK EGGDLASIHS IEEFDFIISQ LGYEPSDELW 840
  841 IGLNDIKIQM YFEWSDGTPV TFTKWLHGEP SHENNRQEDC AVMKGKDGYW ADRACERPLG 900
  901 YICKMKSQAQ TPGVVEVEAG CQKGWKRHGF YCYLIGHTLS TFTEANQTCV SEKAYLTTVE 960
  961 DRYEQAFLTS LVGLRPERYF WIGLSDVQHK GTFQWTVEEG VQFTHWNSDM PGRKAGCVAM1020
 1021 KTGVAGGLWD VLRCEEKAKF VCKHWAEGVT RPPEPTTTPE PKCPEDWGAS SKTSLCFKLF1080
 1081 AKGKHEKKTW FESRDFCRAL GGDLASINSK EEQQAIWRLV TASGSYHELF WLGLTYGSPS1140
 1141 EGFTWSDGSP VSYENWAYGE PNNYQNVEYC GELKGDPGMS WNDINCEHLN NWICQIRKGQ1200
 1201 TPKPEPTPAP HDRFWNDINC GYPNAFICQR HNSSINATVV PTTVSVPGGC KEGWNFYNHK1260
 1261 CFKIFGFVEE ERKNWQEARK DCIGFGGNLA SIYSEKEQAD QSCSNDTKTN PALPKLGKIG1320
 1321 LDFLLAVTHR SLPSSPTTIP TDGFIKYGES SYSLMKLKLQ WHEADDYCKM HTSHIASILD1380
 1381 PYSNAFAWMH MQTLNEPVWI ALNSNLTNND YIWTDKWRVR YTNWAPDEPR LKSACAYMDL1440
 1441 DGYWKTAQCN ESFYFLCKRS DEIPATEPPQ LPGRCPETEH SAWIPFHGHC YYIESSFTRN1500
 1501 WGQASLECLR MGSSLVTIES AAELSFLSYR VEPLQSKTNF WIGLYRNVEV VDAEPTHTLI1560
 1561 TTKADPRKME PSKPSSSATG VVVIVVLLII MGAGFAVYFF YKKRRVHLPR EDAFENTLYF1620
 1621 NSGSSPGTND TKDLMGNIEQ NEHAAI

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