YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76661898
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVRAARPCL LALVLCSCWG ALAEVAPRPS NGCPSRCLCF RTTVRCMHLL LEAVPAVAPQ  60
   61 TSILDLRFNR IREIQPGAFR GLRNLNTLLL NNNQIKSIPG GSFEDLENLK YLYLYKNEIQ 120
  121 AIDRQAFKGL ASLEQLYLHF NQIETLDPES FQHLPKLERL FLHNNRITHL VPGTFNHLES 180
  181 MKRLRLDSNA LRCDCEILWL ADLLKGYARS GNAQAAATCE YPRRIQGRSV ATITPEELDC 240
  241 ERPRITSEPQ DADVTLGNTV FFTCRAEGNP KPEIIWLRNN NELSMKTDSR LNLLDDGTLM 300
  301 IQNTRETDQG IYQCMAKNVA GEVKTQEVTL RYFRSPARPA FVIQPQNTEV LVGESVTLEC 360
  361 SATGHPPPQI TWTRGDRSPV PTDPRVSITP SGGLYIQNVE QEDSGEYACF ASNTVDSIHA 420
  421 TAFIIVQALP QFTVTPQDRA VIEGQTVEFH CEAKGYPQPV IAWTKGGSQL SVDRRHLVLS 480
  481 SGTLRILAVA LHDQGQYECQ AVNIIGSQRV AAHLTVQPRV TPVFTSVPRD MTVEVGSNVQ 540
  541 LPCRPQGEPE PAVTWNKDGV QVTESGKFHI SPEGFLTIRD VGTADAGRYE CVARNTIGQA 600
  601 SVSMVLSVNV PDVSRNGDPF VATSIVEAIA TVDRAINSTR THLFDSRPRS PNDLLALFRY 660
  661 PRDPYTVEQA RAGEIFERTL QLIQEHVRHG LMVDLNGTSY HYNDLVSPQY LSLIANLSGC 720
  721 TAHRRVNNCS DMCFHRKYRT HDGTCNNLQH PMWGASLTAF ERLLKAVYEN GFNTPRGIDP 780
  781 GRRYHGHPLP MPRLVSTALI GSEAITPDEQ FTHMLMQWGQ FLDHDLDSTV VALSQARFSD 840
  841 GQHCSSACSN DPPCFSVALP PDDPRARSGA RCMFFVRSSP VCGSGMTSLL MNSVYPREQI 900
  901 NQLTSYIDAS NVYGSSEHEA RAVRDLASQR GLLRQGIVQR SGKPLLPFAA GPPTECMRDE 960
  961 NESPIPCFLA GDHRANEQLG LTSMHTLWFR EHNRVATELL ALNPHWDGDT VYHEARKLVG1020
 1021 AQMQHITFQH WLPKVLGEAG MKMLGEYRGY DPGVNAGIVN AFATAAFRFG HTLVNPVLQR1080
 1081 LDEDFRPLAL GHVPLHKAFF SPFRIVNEGG IDPLLRGLFG VPGKMRVPSQ LLNTELTERL1140
 1141 FSMAHSVALD LAAINIQRGR DHGVPPYHEY RVYCNLSAAH TFEGLKNEIK SPEIREKLQR1200
 1201 LYGSPLNIDL FPALMVEDLV PGSRLGPTLM CLLSTQFRRL RDGDRLWYEN PGVFTPAQLT1260
 1261 QIKQSSLARI VCDNADNITR VQRDVFRVAE FPHGYSSCDE IPRVDLRVWQ DCCEDCRTRG1320
 1321 QFNAFSYHFR GRRSLEFSYQ EDEPARETGP GKVPRAGKPR VPPSNTTDPS LEQPQGAGTT1380
 1381 DFREFVLEMQ KTITDLRKQI KKLESRLGTD CVDADGSSHA DGAEWTRDPC TICECRDGQV1440
 1441 TCFVETCQPA DCPAPTRVGG ACCPVCPGDS TGTQP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle