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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76661271
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGMSLAREL KVLFYNRKEG QGEAEGSKWK CEREEKRGVS GPQGRSQTAR SPSGHTSGTA  60
   61 KGLLCATPSG AEKRLAWLRG SLPQNTRQSP YCEKSWPRGG TPKKPKALLG PDHRAQLPGL 120
  121 INEDTGPRRL TDSLKAKALL EISMLCQIPR IESLLPRRRW DSQGPHAAEL KKIGQLNTRC 180
  181 KPVQCSWALG RSPLPLPSGI RPELRRPSLS RSLARPFRLP PNPKAVTQKT KAAIGPPWSS 240
  241 RARPRSELRG SKALLCAPSR RAALPHRSEL RGAGEARARP RAPGPRSFGR SVTGFLKRTR 300
  301 RALGSKTPIG LRARISRLAE IRRLGQTLKG NRRRLLLLAA EKAAPLRRIE RRRRPPHLRP 360
  361 QPRETSLDPR RLRQCWAEAA APPWREHPSC SALCSAPPTA QPRRLEDSHA PGAAAPPRIP 420
  421 AAPGCLVAFL GLRVPLHPRP AMRGSRAAAS RLPLDLCTVV LALLGSLPAG AGAQPYHGEK 480
  481 GISVPDHGFC QPISIPLCTD IAYNQTILPN LLGHTNQEEA GLEVHQFYPL VKVQCSPELR 540
  541 FFLCSMYAPV CTVLDKAIPP CRSLCERARQ GCEALMNKFG FQWPERLRCE NFPVHGAGEI 600
  601 CVGQNTSDGS GGAGGGPTAY PTAPYLPDLP FTALPPGAAD GRGRSAFPFS CPRQLKVPPY 660
  661 LGYRFLGERD CGAPCEPGRA NGLMYFKEEE RRFARLWVGV WSVLCCASTL FTVLTYLVDM 720
  721 RRFSYPERPI IFLSGCYFMV AVAHVAGFLL EDRAVCVERF SDDGYRTVAQ GTKKEGCTIL 780
  781 FMVLYFFGMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ YFHLAAWAVP AVKTITILAM 840
  841 GQVDGDLLSG VCYVGLSSVD ALRGFVLAPL FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT 900
  901 KTEKLEKLMV RIGVFSVLYT VPATIVLACY FYEQAFREHW ERTWLLQTCK SYAVPCPPGH 960
  961 FPPMSPDFTV FMIKYLMTMI VGITTGFWIW SGKTLQSWRR FYHRLSHSSK GETAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle