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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76659287
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQGHFWLVR EGIMISPSSP SPNLFFFSPL QIFPFPFTSF PSHLLLSLTP PKACYLKAIE  60
   61 TQPNFAVAWS NLGCVFNAQG EIWLAIHHFE KAVTLDPNFL DAYINLGNVL KEARIFDRAV 120
  121 AAYLRALSLS PNHAVVHGNL ACVYYEQGLI DLAIDTYRRA IELQPHFPDA YCNLANALKE 180
  181 KGSVAEAEDC YNTALRLCPT HADSLNNLAN IKREQGNIEE AVRLYRKALE VFPEFAAAHS 240
  241 NLASVLQQQG KLQEALMHYK EAIRISPTFA DAYSNMGNTL KEMQDVQGAL QCYTRAIQIN 300
  301 PAFADAHSNL ASIHKDSGNI PEAIASYRTA LKLKPDFPDA YCNLAHCLQI VCDWTDYDER 360
  361 MKKLVSIVAD QLEKNRLPSV HPHHSMLYPL SHGFRKAIAE RHGNLCLDKI NVLHKPPYEH 420
  421 PKDLKLSDGR LRVGYVSSDF GNHPTSHLMQ SIPGMHNPDK FEVFCYALSP DDGTNFRVKV 480
  481 MAEANHFIDL SQIPCNGKAA DRIHQDGIHI LVNMNGYTKG ARNELFALRP APIQAMWLGY 540
  541 PGTSGALFMD YIITDQETSP AEVAEQYSEK LAYMPHTFFI GDHANMFPHL KKKAVIDFKS 600
  601 NGHIYDNRIV LNGIDLKAFL DSLPDVKIVK MKCPDGGDNV DSSNTALNMP VIPMNTIAEA 660
  661 VIEMINRGQI QITINGFSIS NGLATTQINN KAATGEEVPR TIIVTTRSQY GLPEDAIVYC 720
  721 NFNQLYKIDP STLQMWANIL KRVPNSVLWL LRFPAVGEPN IQQYAQNMGL PQNRIIFSPV 780
  781 APKEEHVRRG QLADVCLDTP LCNGHTTGMD VLWAGTPMVT MPGETLASRV AASQLTCLGC 840
  841 LELIAKNRQE YEDIAVKLGT DLEYLKKIRG KVWKQRISSP LFNTKQYTME LERLYLQMWE 900
  901 HYAAGNKPDH MIKPVEVTES A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle