YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|61852392, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHVKWPFP AVPPLTWTLA SSVVMGLVGT YSCFWTKCMN HLTVHNKEVL YELIENRGPA  60
   61 TPLITVSNHQ SCMDDPHLWG ILKLRHIWNL KLMRWTPTAA DICFTKELHS HFFSLGKCVP 120
  121 VCRGDGVYQK GMDFILEKLN HGDWVHIFPE GKVNMSSEFL RFKWGIGRLI AECHLNPIIL 180
  181 PLWHVGMNDV LPNSPPYFPR FGQKITVLIG KPFSARPVLE RLRAENKSAV EMRKALTDFI 240
  241 QEEFQRLKSQ AEQLHNHLQA R

Type	Start	End	Confidence
Signal Peptide	1	26	0.43
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	261	0.58