YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76658744
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSSASGLH APGEQRAATR ACSWLMPALW VAGAAADGHL QVSQWQRLAP HSQDRFLLRC  60
   61 YSIPVLHLSQ LVSETSRKDG GQAQGFGDKC LPTALHFVLL GVVIIDMPEP AKSAPAPKKG 120
  121 SKKAVTKAQK KDGKKRKSSR KESYWVYVYK VLKQVHPDTG ISSKAMGIMS SFVKDIFKRI 180
  181 AGEASRLAHY NKRSTITSRE IQTAVRLLLP GELAKHAVSE GTKAVTKYTS SK

Type	Start	End	Confidence
Signal Peptide	1	36	0.75
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	232	0.98