YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134024818, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKWLVVLGLV AFSECIVKIP LRRVNTMRKI LSEKNMLNNF LKERAYRLSQ ISFRGSNLTH  60
   61 PLRNIRDLVY VGRITIGTPP QEFQVVFDTG SSDLWVPSDF CTSPACSTHV RFRHLQSSTF 120
  121 RPTNKTFRIT YGSGRMKGVV AHDTVRIGDL VSTDQPFGLS TAEYGFKDMP FDGVLGLNYP 180
  181 NISSSGAIPI FDKLKNQGAI SEPVFAFYFS KDKREGSVVM FGGVDHRYYK GELKWVPLIQ 240
  241 AGGWIVHMDR ISFERKVIAC SGGCEALVDT GAPLIDGPKP LVDNIQKLIG ATPRGSKYYV 300
  301 SCSAVSTLPS IIFTINSINY RLPARAYILK DSRGHCYTAF KEHRLSLPKE FWILGDVFLR 360
  361 RYFSVFDRGN DRIGLARAV

Type	Start	End	Confidence
Signal Peptide	1	15	0.90
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	379	0.99