YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76656847
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELADCRSP LCPARYANLL GPGSELEQKL WHFRKRQSSK PTSAEISLGQ SSVFNHVLED  60
   61 RMIRDSGICL VDNSILPLGR ISLDHPSCLA EGSLRSAGQA SDLPPGGWAA LLMLIAVTVY 120
  121 IYMRWNGVAT WLWVANDENC GICRMAFNGC CLDCKVPGDD CPLVWGQCSH CFHMHCILKW 180
  181 LNAQQVQQHC PMCRQEWKFK E

Type	Start	End	Confidence
Cytoplasmic	1	103	0.50
Transmembrane Helix	104	123	0.82
Non-Cytoplasmic	124	201	0.58