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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76656338
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEAALALQ PGGSPSVVAA EREAPSPPAG EPLRKRPRRD GPGVGRSSGE PGGTAPEREL  60
   61 PAAAGSCPAA AAALWREAQA AAAAAAEEED NGPGLQGLSR EAPPADDFYD DDDEGEEEEE 120
  121 AAAAIGYRDN LLFGDEIITN GFHSCESDED DRASHASSSD WTPRPRIGPY TFVQQHLMIG 180
  181 TDPRTILKDL LPETIPPPEL DDMTLWQIVI NILSEPPKRK KRKDINTIED AVKLLQECKK 240
  241 IIVLTGAGVS VSCGIPDFRS RDGIYARLAI DFPDLPDPQA MFDIEYFRKD PRPFFKFAKE 300
  301 IYPGQFQPSL CHKFIALSDK EGKLLRNYTQ NIDTLEQVAG IQKIIQCHGS FATASCLICK 360
  361 YKVDCEAVRG DIFNQVVPRC PRCPADEPLA IMKPEIVFFG ENLPEQFHRA MKYDKDEVDL 420
  421 LIVIGSSLKV RPVALIPSSI PHEVPQILIN REPLPHLHFD VELLGDCDVI INELCHRLGG 480
  481 EYAKLCCNPV KLSEITEKPP RIQKELAHLS ELPPTPLNIS EGSSSPERTS PPDSSVIVTL 540
  541 LDQETKSNVD DPDVSESKDH VTEKSQEVQT STRSIESVNE QLESPDLKNA VSNSGEKNER 600
  601 TSVAETVRKC WPARLAKEQI SKRLDDNQYL FLPPNRYIFH GAEVYSDSED DVLSSSSCGS 660
  661 NSDSGTCQSP SLEEPMEDES ENEEFYNGLE DDADVNERAG GTVFEADGGD QEAINEAISV 720
  721 KQEATCINYP SNKS

YRC Informatics Platform - Version 3.0
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