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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76655880, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAGSGPGL GVSAGPGPAA AANATPAEEG ETKQAAAVAA APAGEGTSAA PASAEPGSGE  60
   61 AESGDANSVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA GSVDEENGRQ LGEVELQCGI 120
  121 CTKWFTADTF GIDTSSCLPF MTNYSFHCNV CHHSGNTYFL RKQANLKEMC LSALANLTWQ 180
  181 SRTQDEHPKT MFSKDKDIIP FIDKYWECMT TRQRPGKMTW PNNIVKTMSK ERDVFLVKEH 240
  241 PDPGSKDPEE DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK 300
  301 RKQQDGSTAG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD PHAPDPEKLE 360
  361 LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL TVVGEKGYSM VRASHGVRKG 420
  421 AWYFEITVDE MPPDTAARLG WSQPLGNLQA PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG 480
  481 YGQGDVLGFY INLPEDTETA KSLPDTYKDK ALIKFKSYLY FEEKDFVDKA EKSLKQTPHS 540
  541 EIIFYKNGVN QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYPPKDL TYRPMSDMGW 600
  601 GAVVEHTLAD VLYHVETEVD GRRSPPWEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle