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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76655665
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTRGSNPFP AAAVLLCFRE ESHGVNGTGV LENANSPGGS DVAGGVAAVG GSGGFHLFWG  60
   61 AEVCFLPLKL KPCAQLSGNQ GQLQSPLQFE SSHPEESVMA AFHSGREAAS PPPATGQSSG 120
  121 QRTEGSTVRR EAMGLLDDQA QSIPLAPTVS TLSAVTMEGG GRGCWKLVFL SESEILDFAR 180
  181 MLLPGFLHHS LSPAGSWERN LKHVTKHRLE TTAQAPKHPA GGHRVWIRPS AASSRLGSFT 240
  241 AVAPPFPNPG AGPGGKLAWR TGRQKNQREV WREFLRWRRA LRAGMDRPRP ARLSHARFSK 300
  301 NHSGRTHSMK DKAGRKHRPL DVFDFPDHSQ LSSLSRLGEN EKDEESYETF DPPLHSTAIY 360
  361 ADEEEFSKQC GSHLPSTPQE KEAKRSSDTS EIEASENESV KISAKKPRRK LKPISDESES 420
  421 PEESDVRRKV KPTENISTQH EAVSATALPG LSEKPAEAVT PQKTGPQSAE SSAEKATLAT 480
  481 EHQLETQKNK MLPGKRKKPR SYTTDTSDCA PVWCLKEKKA SDIMELDVFL SAFENILLEY 540
  541 EQKIDSRVCK AAINKFHSNL KEELIKMVQE IQMLKTLKRK NAKIISNIEK KRQRLIEVQD 600
  601 ELLQVEPELK QLQIKYEELQ ERKASLRKAA YFLSNLKQLH QDYSDVQEEE PSVKETYDSS 660
  661 SLPALLFKAR PLLGAEHHLQ NINYQLENLL DQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle