YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76654968
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTLRADSSL LPSACPTQQA RVRCGRTSVG SAVLDHFPTT PTRPCCSKVA FGASGARRNV  60
   61 AVLGPCAGGS KPHGKDCERW SLRRRRESMT DDATRTLGKG SIPPGPVPEG VIRLYSMRFC 120
  121 PYAHRTRLVL RAKGIRHEVI NINLRNKPEW YFTKHPFGQI PVLENSKCQL IYESVIACEY 180
  181 LDDAYPGRKL YPYDPYERAR QKMLLELFYK VPHLTKECLV ALRCGRDCGD LKLALRQEFC 240
  241 NLEEILGYQN TVFFGGDCIS MIDYLFWPWF ERLEVYGIAD CVNHTPALRL WIAAMKQDPT 300
  301 VCSLLTDKNT FLGFLNLYFQ NNPGAFDYGL SC

Type	Start	End	Confidence
Signal Peptide	1	20	0.57
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	332	0.99