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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76654550
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYQLLHMRK LKMSVSQALL VPGSCTPLSS AKQMQLDSMW KSRWRRRPDF CRFVCASHLS  60
   61 LSALRNRYQC GFLNYLHGPE ESTVVEVKST VIENSTVLEN SLLRCLMRIS KKGPDTNSRR 120
  121 GKNERKTSSW VDTARSSRAG LAQSLLGLLR HTKPNPPISS LRSRRTSVPM LKLGGGGQDW 180
  181 ACSVAGTGLG GEEASFEVAR LGQRGKAGSG GPGWGCAGIP NSAPGAGMLQ AGAGGPALEG 240
  241 QGVEEVGTPE GGGEERPARH PPAPALRLLN RKPQGGSGEI KTSENDLQRG RLSRGPRAAP 300
  301 PASGMGDHGG QPERSAPHAP GTPAGVGAAA VNGLLHNGFH PSRLCSRGPP GGGDAAPPRL 360
  361 PLQPELQPQP PPPQHDSPAK KCRLRRRMDS GRKNRPPFPW FGMDIGGTLV KLVYFEPKDI 420
  421 TAEEEQEEVE NLKSIRKYLT SNTAYGKTGI RDVHLELKNL TMCGRKGNLH FIRFPSCAMH 480
  481 KFIQMGSEKN FSSLHTTLCA TGGGAFKFEE DFRTIADLQL HKLDELDCLI QGLLYVDSIG 540
  541 FNGKPECYYF ENPTNPELCQ KKPYCLDNPY PMLLVNMGSG VSILAVYSKD NYKRVTGTSL 600
  601 GGGTFLGLCC LLTGCETFEE ALEMAAKGDS TNVDKLVKDI YGGDYERFGL QGSAVASSFG 660
  661 NMMSKEKRDS ISKEDLARAT LVTITNNIGS IARMCALNEN IDRVVFVGNF LRINMVSMKL 720
  721 LAYAMDFWSK GQLKALFLEH EGYFGAVGAL LELFKMPDDQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle