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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76653829
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASGPELRPL LLLLLLLSPS PAASASDRPR GSDPVNPEKM LVITVATAET EGYRRFLQSA  60
   61 EFFNYTVRTL GLGEEWRGGD VARTVGGGQK VRWLKKEMEK YAEREDMVIM FVDSYDVVLA 120
  121 GSPSELLKKF VQSGSRLLFS AESFCWPEWG LAEQYPEVGT GKRFLNSGGF IGFAPTIHQI 180
  181 VRQWKYKDDD DDQLFYTRLY LDPGLREKLG LSLDHKSRIF QNLNGALDEV VLKFGRNRVR 240
  241 IRNVAYDTLP VVVHGNGPTK LQLNYLGNYV PNGWTPEGGC GFCNQGRRPL PGGQPPPRVL 300
  301 LAVFVEQPTP FLPRFLQRLL LLDYPPDRVT LFLHNNEVYH EPHIDESWPQ LQDHFSAVKL 360
  361 VGPEEALTPG EARDMAMDIC RQDPKCEFYF SLDADTVITN PQTLRILIEA NRSLSLGLVI 420
  421 APMLSRHGKL WSNFWGALSP DEYYARSEDY VELVQRKRVG VWNVPYISQA YVIRGETLRT 480
  481 ELPQREVFSG SDTDPDMAFC KSLRDKGIFL HLSNQHEFGR LLATSRYDTD HLHPDLWQIF 540
  541 DNPLDWKEQY IHENYTRALE GEGLVEQPCP DVYWFPLLSE QMCDELVEEM EHYGQWSGGR 600
  601 HEDSRLAGGY ENVPTVDIHM KQVGYEDQWL QLLRTYVGPM TESLFPGYHT KTRAVMNFVV 660
  661 RYRPDEQPSL RPHHDSSTFT LNVALNHKGL DYEGGGCRFL RYDCVISSPR KGWGLLHPGR 720
  721 LTHYHEGLPT TRGTRYIMVS FVDP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle