YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76653394, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVSPAVYV LGPLLLPLLA VLLMALCVRC RELPGSYDTA VSDSLTPSSI MIKLPPTLVP  60
   61 RPSTTPYPLP SQPDLLPIPR SPQPLGGSHC MASSRQDSDS ANSVASYENE EAACEDADED 120
  121 DYEEDYNNEG YLVVLPDRDP ATSTGNAVSP APASSKPGLR DSAFSMESGE DYVNVPESEE 180
  181 SADASLNGSR EYVNVSQELQ PGAKTKPAAS PSLTDTQNSQ EVEDEEAPDY ENL

Type	Start	End	Confidence
Signal Peptide	1	30	0.92
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	233	0.98