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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76650877
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAGAAAA AAAEGEAPAE MGALVLEKEP RGATERVHGS LGDTSRSEET LPKANPDSLE  60
   61 TAGPSSPASV TVTVGDEGAD TPVGATPLIG DEPENLEGDG DLHGGRILLG HATKSFPSSP 120
  121 SKGGACPSRA KMSMTGAGKS PPSVQSLAMR LLSMPGAQGA PAAGPEPPPA TASPEGQPKV 180
  181 HRARKTMSKP GNGQPPVPEK RPPEVQHFRM SDDVHSLGKV TSDVAKRRKL NSGGGLSEEL 240
  241 ASTRSSGEVT LEKGDPGSLE EWETVVGDDF SLYYDSYSVD ERVDSDSKSE VEALAEQLSE 300
  301 EEEEEEEEEE EEEEEEEEEE EEEEDEESGN QSDRSGSSGR RKAKKKWRKD SPWVKPSRKR 360
  361 RKREPPRAKE PRGVNGVGSS GPSEYMEVPL GSLELPSEGT LSPNHAGVSN DTSSLETERG 420
  421 FEELPLCSCR MEAPKIDRIS ERAGHKCMAT ESVDGELSGC NAAILKRETM RPSSRVALMV 480
  481 LCETHRARMV KHHCCPGCGY FCTAGTFLEC HPDFRVAHRF HKACVSQLNG MVFCPHCGED 540
  541 ASEAQEVTIP RGDGVTPPAD IHAFSHSARM RGQGEPRRPP CDPLADTIDS SGPSLTLPNG 600
  601 GCLSAVGLPP GPGREALEKA LVIQESERRK KLRFHPRQLY LSVKQGELQK VILMLLDNLD 660
  661 PNFQSDQQSK RTPLHAAAQK GSVEICHVLL QAGANINAVD KQQRTPLMEA VVNNHLEVAR 720
  721 YMVQRGGCVY SKEEDGSTCL HHAAKIGNLE MVSLLLSTGQ VDVNAQDSGG WTPIIWAAEH 780
  781 KHIEVIRMLL TRGADVTLTD NEENICLHWA SFTGSAAIAE VLLNARCDLH AVNYHGDTPL 840
  841 HIAARESYHD CVLLFLSRGA NPELRNKEGD TAWDLTPERS DVWFALQLNR KLRLGVGNRA 900
  901 IRTEKIICRD VARGYENVPI PCVNGVDGEP CPEDYKYISE NCETSTMNID RNITHLQHCT 960
  961 CVDDCSSSNC LCGQLSIRCW YDKDGRLLQE FNKIEPPLIF ECNQACSCWR NCKNRVVQSG1020
 1021 IKVRLQLYRT AKMGWGVRAL QTIPQGTFIC EYVGELISDA EADVREDDSY LFDLDNKDGE1080
 1081 VYCIDARYYG NISRFINHLC DPNIIPVRVF MLHQDLRFPR IAFFSSRDIR AGEELGFDYG1140
 1141 DRFWDIKSKY FTCQCGSEKC KHSAEAIALE QSRLARLDPH PELLPELSSL PPVNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle