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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76648520
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPGELREAS STSVLTLLLW LFSACFLFTS VLYCRALGSS REALLLTMRF CFRGQEQPLL  60
   61 CRAALDGYQA VSCAKQNLPG GAVSSFSSLL QLEAQELACG RAHEGLLHVC CWDWLIPSRQ 120
  121 APLADQILVH HRGHLSPLCQ ANRKCACGPE QSTRGRDPHS PPTACLVTRT SRRCPAEMLR 180
  181 LPAVLRQMRP VSRALALHLT RAYAKDVKFG ADARALMLQG VDLLADAVAV TMGPKGRTVI 240
  241 IEQSWGSPRV TKDGVTVAKS IDLKDKYKNI GAKLVQDVAN NTNEEAGDGT TTATVLARSI 300
  301 AKEGFEKISK GANPVEIRRG VMLAVDAVIV ELKKQSKPVT TPEEIAQVAT ISANGDKEIG 360
  361 NIISDAMKKV GRKGVITVKD GKTLNDELEI IEGMKFDRGY ISPYFINTSK GQKCEFQDAY 420
  421 VLLSEKKISS VQSIVPALEI ANAHRKPLVI IAEDVDGEAL STLVLNRLKV GLQVVAVKAP 480
  481 GFGDNRKNQL KDMAIATGGA VFGEEGLNLN LEDVQPHDLG KVGEVIVTKD DAMLLKGKGD 540
  541 KAQIEKRIQE IIEQLDITTS EYEKEKLNER LAKLSDGVAV LKVGGTSDVE VNEKKDRVTD 600
  601 ALNATRAAVE EGIVLGGDCA LLRCIPALES ITPANEDQKT GIEIIKKTLK IPAMTIAKNA 660
  661 GVEGSLIVEK IMQSSSEVGY DAMLGDFVNM VEKGIIDPTK VVRTALLDAA GVASLLTTAE 720
  721 VVVTEIPKEE KDPGMGGMGG MGGGMGGGMF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle