YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76646691
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDVGPAPDG GAPGVPPGRG LSPRIGQATS GPAPSRGRGC TFDTAQPIGA ALPAARGPVG  60
   61 PEATEGAGSA ARRGRNRRRL ERALAWWLCA GLAMGLLSGA ARALVRGADR MSKWTSKRGP 120
  121 RTFHKSRGAK GVGFHGRGGK FVLVKEMVPE LVVPDLAGFK LKPYVNYRAP EGTDVPLTAK 180
  181 QLFLETAAPA IEKDFKAGTF DPEHLERYGF EPTQEGKLFQ LYPKNFPR

Type	Start	End	Confidence
Cytoplasmic	1	82	0.91
Transmembrane Helix	83	105	0.92
Non-Cytoplasmic	106	228	0.91