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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76645794
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPGPGGS AASSAPPAAT AQVLQAQPEK PQHYTYLKEF RTEQCPLFVQ HKCTQHRPYT  60
   61 CFHWHFVNQR RRRSIRRRDG TFNYSPDVYC TKYDEATGLC PEGDECPFLH RTTGDTERRY 120
  121 HLRYYKTGIC IHETDAKGNC TKNGLHCAFA HGPHDLRSPV YDIRELQAME ALQNGQTTVE 180
  181 GSMEGQSAGA ASHAMIEKIL SEEPRWQETA YVLGNYKTEP CKKPPRLCRQ GYACPYYHNS 240
  241 KDRRRSPRKH KYRSSPCPNV KHGDEWGDPG KCENGDSCQY CHTRTEQQFH PEIYKSTKCN 300
  301 DMQQSGSCPR GPFCAFAHVE QPPLSDDLQP SSAVSSPTQP GPVLYMPSAA GDSVPVSPSS 360
  361 PHAPDLSALL CRNSSLGSPS NLCGSPPGSI RKPSNLEGIV FPGESGLAPG SYKKAPGFER 420
  421 EDQVGAEYLK NLKCQAKLKP HSLEPRSQEQ PLLQPKQDML GILPVGSPLT SSISSSITSS 480
  481 LAATPPSPAG TSSVPGMNAN ALPFYPTSDT VESVIESALD DLDLNEFGVA ALEKTFDNST 540
  541 VSHPGSITMG GSLLQSSAPV NIPGSLGSSA SFHSASPSPP VSLSSHFLQQ PQGHLSQSEN 600
  601 TFLGTSASHG SLGLNGMNSS IWEHFASGSF SPGTSPAFLS GPGAAELARL RQELDEANGT 660
  661 IKQWEESWKQ AKQACDAWKK EAEEAGERAS AAGAECELAR EQRDALEVQV KKLQEELERL 720
  721 HSGPDPQALP AFPGLEAVFH MQSVKCLKCQ EQNRAVLPCQ HAVLCELCAE GSQGGKLEGA 780
  781 EGRGQAFRAG PVHPASPGQG ERQSVEDSGA TLVPSSSRAV GGEELRTVRT KAGPGPALLA 840
  841 RRGSVRIPWC SLSAADVLPQ PAGAFNPGPG DRPGQRTLQS SVVSGNWRTC LPKDKARRSF 900
  901 SGTDSACS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle