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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76645139
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVRRGHVAP QNTYLDTIIR KFEGQSRKFL IANAQMENCA IIYCNDGFCE LFGYSRVEVM  60
   61 QRPCTCDFLT GPNTPRSAMS RLAQALLGAE ECKVDILYYR KDASCFRCLV DVVPVKNEDG 120
  121 AVIMFILNFE DLAQLLAKRG SRSLSQRLLR QSFLGSDGSH GRSGAQGPGA GRVKYRTISQ 180
  181 IPQFTLNFVE FNLEKHRSGS TTEIEIIAPH KVVERTQNVT EKVTQVRPVL SLGADVLPEY 240
  241 KLQAPRIHRG TLLHYSPFKA VWDWLILLLV IYTAVFTPYS AAFLLSDQDE SQRGDCGYTC 300
  301 SPLTVVDLIV DIMFVVDIVI NFRTTYVNTN DEVVSHPRRI AVHYFKGWFL IDMVAAIPFD 360
  361 LLIFRTGSDE VSKPCSGRPP TTTTLIGLLK TARLLRLVRV ARKLDRYSEY GAAVLFLLMC 420
  421 TFALIAHWLA CIWYAIGNVE RPYLEPKIGW LDSLGAQLGK RYNGSDPASG PSVQDKYVTA 480
  481 LYFTFSSLTS VGFGNVSPNT NSEKVFSICV MLIGCKALNQ NPGPLAQVHI DELCLPALMY 540
  541 ASIFGNVSAI IQRLYSGTAR YHTQMLRVKE FIRFHQIPNP LRQRLEEYFQ HAWSYTNGID 600
  601 MNAVLKGFPE CLQADICLHL HRALLQHCPA FHGASKGCLR ALAVKFKTTH APPGDTLVHL 660
  661 GDVLSTLYFI SRGSIEILRD DVVVAILGKN DIFGEPVSLH ARPGKSSADV RALTYCDLHK 720
  721 IQRADLLEVL DMYPAFADSF WSKLEVTFNL RDAGGGLQSS PQQAPGSQDH QQGFFLSDNQ 780
  781 SGAAPSLSIS DASGLWPELL QQVPPRPNQS PQNPQGDSDC WPRELGSRLE QLQAQMNRLE 840
  841 SRMSSDLSRI LKLLQQPLPQ DHTGYILGAS TSNDLALFPA TSATQSPGTR LPRGDPPPAQ 900
  901 MPSYGDMDEW RPELRNSSSR MPPSAVEMDR TLTLSSEQKQ PEGLLSPLAS PLCPLEVQGL 960
  961 VCGPRYPSLP EHLSSVPKQL EFQRHGSDPG FSRS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle