YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ACBD4_BOVIN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGIENESPEP DCQKQFQAAV SVIQNLPKNG SYRPSYEEML RFYSYYKQAT MGPCLIPQPG  60
   61 FWDPIGRYKW EAWNSLGQMS REEAMSAYIT EMKLVAQKVI DTVPLGEVAE DMFGYFEPLY 120
  121 QVIPDMPRPP ETFLRRVTGW KEQALNGDAE AAPEPPCLPK EPAPPSLESQ PPRDQDSEVF 180
  181 CDSVEQLEPE LVGEEQRGAL GGENDTRNSP EPPAEKGRLE GPLLGPQELD SWLVGTVRAL 240
  241 QDSMRDVQGR LQSLESMPMP PEQMPPPSAR PRPLRLSGPT LIFFLLWPFI VQWLFRQFRT 300
  301 QKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	275	0.86
Transmembrane Helix	276	295	0.93
Cytoplasmic	296	303	0.78