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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76643758, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEAHLLPAA DVLRRFSVTA EGGLSAEQVT GARERYGPNE LPTEEGKSLW ELVLEQFEDL  60
   61 LVRILLLAAL VSFVLAWFEE GEETTTAFVE PLVIMLILVA NAIVGVWQER NAESAIEALK 120
  121 EYEPEMGKVI RADRKGVQRI LARDIVPGDI VEVAVGDKVP ADLRLIDIKS TTLRVDQSIL 180
  181 TGESVSVTKH TDAIPDPRAV NQDKKNMLFS GTNIASGKAV GVAVATGLHT ELGKIRSQMA 240
  241 AVEPERTPLQ QKLDEFGQQL SRAISVICMA VWVINIGHFA DPAHGGSWLR GAVYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMARKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVCRMFVVA EAGTGTCRLH EFTISGTTYA PEGEVRQGER RVRCGQFDGL VELATICALC 420
  421 NDSALDYNEA KGVYEKVGEA TETALTCLVE KMNVFDTDLQ TLSRVERAGA CNAVIKQLMQ 480
  481 KEFTLEFSRD RKSMSVYCTP TRPGLVAQGS KMFVKGAPES VIERCSSVRV GSRTVPLDTT 540
  541 SREQILAKVK DWGSGLDTLR CLALATRDMP PRKEDMQLDD CSKFVQYETD LTFVGCVGML 600
  601 DPPRPEVAAC IARCHQAGIR VVMITGDNKG TAVAICRRLG IFEDTEDVAG KAYTGREFDD 660
  661 LSPEQQRHAC RTARCFARVE PTHKSRIVEN LQSFNEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKSA AEMVLSDDNF ASIVAAVEEG RAIYSNMKQF IRYLISSNVG EVVCIFLTAI 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMEKR PRNPREALIS GWLFFRYLAI 840
  841 GVYVGLATVA AATWWFLYDA EGPQVTFYQL RNFLKCSEDN PVFAGIDCEV FESRFPTTMA 900
  901 LSVLVTIEMC NALNSVSENQ SLLRMPPWLN PWLLAAVAMS MALHFLILLV PPLPLIFQVT 960
  961 PLNGRQWVAV LQISLPVILL DEALKYLSRK HVDEDKGQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle