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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|164519010, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLLGLAGL LAVLIMLQPS EGVPPAVPGE VDTSVVLTCM EEAKRLVDKV YKERRESIKQ  60
   61 RLHSGLASPM ELLSYFKQPV AATRTAVRAA DYLHVALSLL ERKLRALWPG RFNVTDVLTP 120
  121 AQLNLLSKTS GCAHQDLGVS CPEKDEYRTI TGQCNNRRSP TLGASNRPFV RWLPAEYEDG 180
  181 FSLPFGWTPR VKRNGFPVPL ARAVSNEIVR FPTEKLTPDQ QRSLMFMQWG QLLDHDLDFS 240
  241 PEPAARVSFL TGINCETSCL QQPPCFPLKI PPNDPRIKNQ QDCIPFFRSS PACTQSNITI 300
  301 RNQINALTSF VDASMVYGSE DPLAMRLRNL TNQLGLLAVN TRFQDNGRAL LPFDTLRHDP 360
  361 CRLTNRSANI PCFLAGDSRA SEMPELTSMH TLFVREHNRL AKELKRLNAH WNGERLYQEA 420
  421 RKIVGAMVQI ITYRDYLPLV LGREAMRKYL RPYCSYNDSV DPRISNVFTN AFRYGHTLIQ 480
  481 PFMFRLNSRY QPMQPNPRVP LSRVFFASWR VVLEGGIDPI LRGLMATPAK LNRQNQIAVD 540
  541 EIRERLFEQV MRIGLDLPAL NMQRSRDHGL PGYNAWRRFC GLPVPNTVGE LGTVLRNLDL 600
  601 ARRLMKLYQT PNNIDIWIGG VAEPLNKNGR VGPLLACLIG TQFRKLRDGD RFWWQNKGVF 660
  661 SKKQQQALAK ISLPRIICDN TGITFVSKNN IFMSNRFPRD FVRCSRVPAL NLAPWRERR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle