YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76641527
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASQQQASA TTSTASVSGP GSAGGSGPQQ QPQPPAQLVG PAQSGLLQQQ QQDFDPVQRY  60
   61 KMLIPQLKES LQTLMKVAAQ NLIQNTNIDN GQKSSDGPIQ RFDKCLEEFY ALCDQLELCL 120
  121 VAEVLIKPIF PAELTGPERR SHMPEVTQQR LAHECLSQSC DSAKHSPTLV PTATKPDAVQ 180
  181 PDSLPYPQYL AVIKAQIACA KDIHTALLDC ANKVTGKTPA PPTGPGGTL

Type	Start	End	Confidence
Signal Peptide	1	23	0.86
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	229	0.99